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explain_parser.py 9.9 kB

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  1. # Copyright 2020 Huawei Technologies Co., Ltd
  2. #
  3. # Licensed under the Apache License, Version 2.0 (the "License");
  4. # you may not use this file except in compliance with the License.
  5. # You may obtain a copy of the License at
  6. #
  7. # http://www.apache.org/licenses/LICENSE-2.0
  8. #
  9. # Unless required by applicable law or agreed to in writing, software
  10. # distributed under the License is distributed on an "AS IS" BASIS,
  11. # WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
  12. # See the License for the specific language governing permissions and
  13. # limitations under the License.
  14. # ============================================================================
  15. """
  16. File parser for MindExplain data.
  17. This module is used to parse the MindExplain log file.
  18. """
  19. from collections import namedtuple
  20. from google.protobuf.message import DecodeError
  21. from mindinsight.datavisual.common import exceptions
  22. from mindinsight.explainer.common.enums import ExplainFieldsEnum
  23. from mindinsight.explainer.common.log import logger
  24. from mindinsight.datavisual.data_access.file_handler import FileHandler
  25. from mindinsight.datavisual.data_transform.ms_data_loader import _SummaryParser
  26. from mindinsight.datavisual.proto_files import mindinsight_summary_pb2 as summary_pb2
  27. from mindinsight.utils.exceptions import UnknownError
  28. HEADER_SIZE = 8
  29. CRC_STR_SIZE = 4
  30. MAX_EVENT_STRING = 500000000
  31. BenchmarkContainer = namedtuple('BenchmarkContainer', ['benchmark', 'status'])
  32. MetadataContainer = namedtuple('MetadataContainer', ['metadata', 'status'])
  33. InferfenceContainer = namedtuple('InferenceContainer', ['ground_truth_prob',
  34. 'ground_truth_prob_sd',
  35. 'ground_truth_prob_itl95_low',
  36. 'ground_truth_prob_itl95_hi',
  37. 'predicted_label',
  38. 'predicted_prob',
  39. 'predicted_prob_sd',
  40. 'predicted_prob_itl95_low',
  41. 'predicted_prob_itl95_hi'])
  42. SampleContainer = namedtuple('SampleContainer', ['sample_id', 'image_path', 'ground_truth_label', 'inference',
  43. 'explanation', 'status'])
  44. class ExplainParser(_SummaryParser):
  45. """The summary file parser."""
  46. def __init__(self, summary_dir):
  47. super(ExplainParser, self).__init__(summary_dir)
  48. self._latest_offset = 0
  49. def list_events(self, filenames):
  50. """
  51. Load summary file and parse file content.
  52. Args:
  53. filenames (list[str]): File name list.
  54. Returns:
  55. tuple, will return (file_changed, is_end, event_data),
  56. file_changed (bool): True if the 9latest file is changed.
  57. is_end (bool): True if all the summary files are finished loading.
  58. event_data (dict): return an event data, key is field.
  59. """
  60. summary_files = self.sort_files(filenames)
  61. is_end = False
  62. file_changed = False
  63. event_data = {}
  64. filename = summary_files[-1]
  65. file_path = FileHandler.join(self._summary_dir, filename)
  66. if filename != self._latest_filename:
  67. self._summary_file_handler = FileHandler(file_path, 'rb')
  68. self._latest_filename = filename
  69. self._latest_offset = 0
  70. file_changed = True
  71. new_size = FileHandler.file_stat(file_path).size
  72. if new_size == self._latest_offset:
  73. is_end = True
  74. return file_changed, is_end, event_data
  75. while True:
  76. start_offset = self._summary_file_handler.offset
  77. try:
  78. event_str = self.event_load(self._summary_file_handler)
  79. if event_str is None:
  80. self._summary_file_handler.reset_offset(start_offset)
  81. is_end = True
  82. return file_changed, is_end, event_data
  83. if len(event_str) > MAX_EVENT_STRING:
  84. logger.warning("file_path: %s, event string: %d exceeds %d and drop it.",
  85. self._summary_file_handler.file_path, len(event_str), MAX_EVENT_STRING)
  86. continue
  87. field_list, tensor_value_list = self._event_decode(event_str)
  88. for field, tensor_value in zip(field_list, tensor_value_list):
  89. event_data[field] = tensor_value
  90. logger.debug("Parse summary file offset %d, file path: %s.",
  91. self._summary_file_handler.offset, file_path)
  92. return file_changed, is_end, event_data
  93. except (exceptions.CRCFailedError, exceptions.CRCLengthFailedError) as ex:
  94. self._summary_file_handler.reset_offset(start_offset)
  95. is_end = True
  96. logger.warning("Check crc failed and ignore this file, file_path=%s, offset=%s. Detail: %r.",
  97. self._summary_file_handler.file_path, self._summary_file_handler.offset, str(ex))
  98. return file_changed, is_end, event_data
  99. except (OSError, DecodeError, exceptions.MindInsightException) as ex:
  100. is_end = True
  101. logger.warning("Parse log file fail, and ignore this file, detail: %r,"
  102. "file path: %s.", str(ex), self._summary_file_handler.file_path)
  103. return file_changed, is_end, event_data
  104. except Exception as ex:
  105. logger.exception(ex)
  106. raise UnknownError(str(ex))
  107. finally:
  108. self._latest_offset = self._summary_file_handler.offset
  109. @staticmethod
  110. def _event_decode(event_str):
  111. """
  112. Transform `Event` data to tensor_event and update it to EventsData.
  113. Args:
  114. event_str (str): Message event string in summary proto, data read from file handler.
  115. """
  116. logger.debug("Start to parse event string. Event string len: %s.", len(event_str))
  117. event = summary_pb2.Event.FromString(event_str)
  118. logger.debug("Deserialize event string completed.")
  119. fields = {
  120. 'sample_id': ExplainFieldsEnum.SAMPLE_ID,
  121. 'benchmark': ExplainFieldsEnum.BENCHMARK,
  122. 'metadata': ExplainFieldsEnum.METADATA
  123. }
  124. tensor_event_value = getattr(event, 'explain')
  125. field_list = []
  126. tensor_value_list = []
  127. for field in fields:
  128. if getattr(tensor_event_value, field, None) is None:
  129. continue
  130. if ExplainFieldsEnum.METADATA.value == field and not tensor_event_value.metadata.label:
  131. continue
  132. tensor_value = None
  133. if field == ExplainFieldsEnum.SAMPLE_ID.value:
  134. tensor_value = ExplainParser._add_image_data(tensor_event_value)
  135. elif field == ExplainFieldsEnum.BENCHMARK.value:
  136. tensor_value = ExplainParser._add_benchmark(tensor_event_value)
  137. elif field == ExplainFieldsEnum.METADATA.value:
  138. tensor_value = ExplainParser._add_metadata(tensor_event_value)
  139. logger.debug("Event generated, label is %s, step is %s.", field, event.step)
  140. field_list.append(field)
  141. tensor_value_list.append(tensor_value)
  142. return field_list, tensor_value_list
  143. @staticmethod
  144. def _add_image_data(tensor_event_value):
  145. """
  146. Parse image data based on sample_id in Explain message
  147. Args:
  148. tensor_event_value: the object of Explain message
  149. """
  150. inference = InferfenceContainer(
  151. ground_truth_prob=tensor_event_value.inference.ground_truth_prob,
  152. ground_truth_prob_sd=tensor_event_value.inference.ground_truth_prob_sd,
  153. ground_truth_prob_itl95_low=tensor_event_value.inference.ground_truth_prob_itl95_low,
  154. ground_truth_prob_itl95_hi=tensor_event_value.inference.ground_truth_prob_itl95_hi,
  155. predicted_label=tensor_event_value.inference.predicted_label,
  156. predicted_prob=tensor_event_value.inference.predicted_prob,
  157. predicted_prob_sd=tensor_event_value.inference.predicted_prob_sd,
  158. predicted_prob_itl95_low=tensor_event_value.inference.predicted_prob_itl95_low,
  159. predicted_prob_itl95_hi=tensor_event_value.inference.predicted_prob_itl95_hi
  160. )
  161. sample_data = SampleContainer(
  162. sample_id=tensor_event_value.sample_id,
  163. image_path=tensor_event_value.image_path,
  164. ground_truth_label=tensor_event_value.ground_truth_label,
  165. inference=inference,
  166. explanation=tensor_event_value.explanation,
  167. status=tensor_event_value.status
  168. )
  169. return sample_data
  170. @staticmethod
  171. def _add_benchmark(tensor_event_value):
  172. """
  173. Parse benchmark data from Explain message.
  174. Args:
  175. tensor_event_value: the object of Explain message
  176. Returns:
  177. benchmark_data: An object containing benchmark.
  178. """
  179. benchmark_data = BenchmarkContainer(
  180. benchmark=tensor_event_value.benchmark,
  181. status=tensor_event_value.status
  182. )
  183. return benchmark_data
  184. @staticmethod
  185. def _add_metadata(tensor_event_value):
  186. """
  187. Parse metadata from Explain message.
  188. Args:
  189. tensor_event_value: the object of Explain message
  190. Returns:
  191. benchmark_data: An object containing metadata.
  192. """
  193. metadata_value = MetadataContainer(
  194. metadata=tensor_event_value.metadata,
  195. status=tensor_event_value.status
  196. )
  197. return metadata_value